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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs60181254 chr2:67538173 C/T 1.77E-7 507 37.37 37.7 2.03 KM Plot
KIRC rs60283385 chr19:46329079 T/C 7.38E-8 503 38.05 29.13 1.77 KM Plot
KIRC rs60512607 chr6:26054171 T/A 9.66E-9 505 37.7 33.82 3.37 KM Plot
KIRC rs6058951 chr20:29969913 A/G 9.3E-5 509 11.47 39.18 36.97 KM Plot
KIRC rs60590907 chr11:1529529 G/GTC 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs6061162 chr20:29893501 C/T 6.45E-5 504 11.47 41.28 37.03 KM Plot
KIRC rs60896094 chr11:34806561 A/G 9.4E-8 504 37.5 32.23 3.3 KM Plot
KIRC rs609200 chr11:125383808 G/A 7.28E-6 498 36.95 37.67 1.43 KM Plot
KIRC rs612303 chr3:124360499 T/C 4.85E-5 505 37.03 40.05 16.92 KM Plot
KIRC rs61353631 chr3:197312702 G/A 4.02E-5 497 39.7 31.07 27.53 KM Plot
KIRC rs61440110 chr11:1496553 C/CAT 8.68E-5 507 5.47 37.6 37.4 KM Plot
KIRC rs614500 chr3:124364780 C/T 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs615408 chr3:124364569 G/T 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs61611231 chr11:105636763 AGGG/A 7.99E-5 502 34.65 47.82 20.6 KM Plot
KIRC rs61748149 chr2:109381438 A/G 3.16E-12 508 37.75 26.17 2.3 KM Plot